Current topics in human genetics : studies in complex diseases /
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Imprint: | Hackensack, NJ : World Scientific, ©2007. |
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Description: | 1 online resource (xii, 950 pages) : illustrations (some color) |
Language: | English |
Subject: | |
Format: | E-Resource Book |
URL for this record: | http://pi.lib.uchicago.edu/1001/cat/bib/11178928 |
Table of Contents:
- Preface; Acknowledgments; 1 Regression-based Linkage Analysis Methods Tao Wang and Robert C. Elston; 1. INTRODUCTION; 2. THE NUMBER (PROPORTION) OF ALLELES SHARED IBD; 3. VARIOUS REGRESSION-BASED METHODS WITH DIFFERENT TRAIT SIMILARITY MEASURES; 3.1. The Original Haseman-Elston Regression; 3.2. New Regression-based Methods; 3.3. Regression-based Linkage Methods for Any Type of Pedigree Structure; 4. DISCUSSION; ACKNOWLEDGMENTS; REFERENCES; 2 Admixture Mapping: Methods and Applications Xiaofeng Zhu; 1. INTRODUCTION; 2. ADMIXTURE MAPPING; 3. HIDDEN MARKOV MODEL
- 4. EM ALGORITHM FOR ESTIMATING ANCESTRY5. MARKOV CHAIN MONTE CARLO (MCMC) APPROACH; 6. INFORMATIVE MARKERS FOR ANCESTRY; 7. POWER OF ADMIXTURE MAPPING; 8. APPLICATION; 9. LIMITATIONS; 10. CONCLUSIONS; ACKNOWLEDGMENT; REFERENCES; 3 Survival Analysis Methods in Genetic Epidemiology Hongzhe Li; 1. INTRODUCTION; 2. SURVIVAL ANALYSIS METHODS FOR AGGREGATION ANALYSIS; 2.1. Shared Frailty Models Based on Random Sample of Families; 2.2. Multivariate Frailty Models; 2.3. Familiar Aggregation Based on Case-Control Family Design; 3. SURVIVAL ANALYSIS METHODS FOR SEGREGATION ANALYSIS
- 3.1. The Cox Gene Model for Gene Segregation3.2. Cox Model with Major Gene and Random Environmental Effects for Age of Onset; 4. SURVIVAL ANALYSIS METHODS FOR LINKAGE ANALYSIS; 4.1. Construction of Genetic Frailties for Sibship; 5. SURVIVAL ANALYSIS METHODS FOR FAMILY-BASED GENETIC ASSOCIATION ANALYSIS; 5.1. Survival Analysis Methods for Family-based Association Tests; 5.2. Test of Genetic Association in the Presence of Linkage; 6. SURVIVAL MODELS FOR HAPLOTYPE EFFECTS BASED ON COHORT, CASE-COHORT, AND NESTED CASE-CONTROL DESIGNS
- 6.1. Survival Model for Haplotype Inference Based on Cohort Data6.2. Test of Haplotype Association for Case-Cohort and Nested Case-Control Designs; 7. SURVIVAL ANALYSIS METHODS FOR GENE CHARACTERIZATION; 8. ASCERTAINMENT CORRECTION; 9. SURVIVAL ANALYSIS METHODS IN THE GENOMICS ERA; 10. CONCLUSION AND FUTURE DIRECTIONS; ACKNOWLEDGMENTS; REFERENCES; 4 Genetic Association Studies: Concepts and Applications Jun Li; 1. INTRODUCTION; 2. BASIC METHODS AND COMMON APPLICATIONS; 2.1. Basic Analysis Methods; 2.2. Common Applications; 2.2.1. Candidate Gene Studies; 2.2.2. LD-based Gene Mapping
- 2.2.3. Characterizing Established Disease Genes3. GENERAL DESIGNS; 3.1. Population-based Controls; 3.1.1. Cohort-Control Design; 3.1.2. Case-Control Design; 3.2. Family-based Studies: Family Member Controls and the Transmission/Disequilibrium Test; 4. GENOMIC CONTROL AND STRUCTURED ASSOCIATION; 4.1. Genomic Control; 4.2. Structured Association; 5. PRACTICAL CONSIDERATIONS IN WHOLE-GENOME STUDIES; 5.1. Power and Sample Size; 5.2. Allelic Heterogeneity; 5.3. Common versus Rare Variants; 5.4. Multiple Testing Corrections; 5.5. Uncertainties in Phenotyping; 5.6. Future Outlook; ACKNOWLEDGMENTS