Plant genomics databases : methods and protocols /
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| Imprint: | New York, NY : Humana Press, [2017] ©2017 |
|---|---|
| Description: | 1 online resource (xii, 336 pages) : illustrations (some color) |
| Language: | English |
| Series: | Methods in molecular biology, 1064-3745 ; volume 1533 Methods in molecular biology (Clifton, N.J.) ; v. 1533. |
| Subject: | |
| Format: | E-Resource Book |
| URL for this record: | http://pi.lib.uchicago.edu/1001/cat/bib/11270170 |
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| 245 | 0 | 0 | |a Plant genomics databases : |b methods and protocols / |c edited by Aalt D.J van Dijk. |
| 264 | 1 | |a New York, NY : |b Humana Press, |c [2017] | |
| 264 | 4 | |c ©2017 | |
| 300 | |a 1 online resource (xii, 336 pages) : |b illustrations (some color) | ||
| 336 | |a text |b txt |2 rdacontent | ||
| 337 | |a computer |b c |2 rdamedia | ||
| 338 | |a online resource |b cr |2 rdacarrier | ||
| 347 | |a text file | ||
| 347 | |b PDF | ||
| 490 | 1 | |a Methods in molecular biology, |x 1064-3745 ; |v volume 1533 | |
| 504 | |a Includes bibliographical references and index. | ||
| 588 | 0 | |a Online resource; title from PDF title page (SpringerLink, viewed December 21, 2016). | |
| 505 | 0 | |a Ensembl Plants: Integrating Tools for Visualizing, Mining and Analyzing Plant Genomics Data -- PGSB/MIPS PlantsDB Database Framework for the Integration and Analysis of Plant Genome Data -- Plant Genome DataBase Japan (PGDBj) -- FLAGdb++: A Bioinformatic Environment to Study and Compare Plant Genomes -- Mining Plant Genomic and Genetic Data Using the GnpIS Information System -- The Bio-Analytic Resource for Plant Biology -- The Evolution of Soybean Knowledge Base (SoyKB) -- Using TropGeneDB: a Database Containing Data on Molecular Markers, QTLs, Maps, Genotypes, and Phenotypes for Tropical Crops -- Species-Specific Genome Sequence Databases: A Practical Review -- A Guide to the PLAZA 3.0 Plant Comparative Genomics Database -- Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0 -- PlaNet: Comparative Co-Expression Network Analyses for Plants -- Practical Utilization of OryzaExpress and Plant Omics Data Center Databases to Explore Gene Expression Networks in Oryza sativa and Other Plant Species -- Pathway Analysis and Omics Data Visualization using Pathway Genome Databases: FragariaCyc, A Case Study -- CSGRqtl: A Comparative Quantitative Trait Locus Database for Saccharinae Grasses -- Plant Genome Duplication Database -- Variant Effect Prediction Analysis using Resources Available at Gramene Database -- Plant Promoter Database -- Construction of the Leaf Senescence Database and Functional Assessment of Senescence-Associated Genes. | |
| 520 | |a This volume introduces databases containing the results from the recent revolution in sequencing technologies. Chapters in Plant Genomics Databases: Methods and Protocols describe database content, as well as typical use-cases. Some chapters explore databases that primarily present genome sequences focusing on one or a few related species, while others include additional datatypes and/or data from various plant species. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, Plant Genomics Databases: Methods and Protocols is a valuable resource for providing clear guidance in accessing an important collection of plant databases that can be used to add biological value to genomic data. | ||
| 650 | 0 | |a Plant genomes |x Databases. | |
| 650 | 0 | |a Genomics |x Databases. | |
| 650 | 0 | |a Gene libraries. |0 http://id.loc.gov/authorities/subjects/sh90004176 | |
| 650 | 1 | 2 | |a Databases, Genetic |
| 650 | 1 | 2 | |a Plants |x genetics |
| 650 | 2 | |a Gene Library |0 https://id.nlm.nih.gov/mesh/D015723 | |
| 650 | 2 | 2 | |a Genomic Library |
| 650 | 6 | |a Plantes |x Génomes |x Bases de données. | |
| 650 | 6 | |a Génomique |x Bases de données. | |
| 650 | 6 | |a Banques de gènes. | |
| 650 | 7 | |a Botany & plant sciences. |2 bicssc | |
| 650 | 7 | |a Science |x Life Sciences |x Botany. |2 bisacsh | |
| 650 | 7 | |a Gene libraries |2 fast | |
| 650 | 7 | |a Genomics |2 fast | |
| 650 | 7 | |a Plant genomes |2 fast | |
| 655 | 7 | |a Databases |2 fast | |
| 655 | 7 | |a Laboratory manuals. |2 lcgft | |
| 700 | 1 | |a Dijk, Aalt D. J. van, |e editor. | |
| 776 | 0 | 8 | |i Printed edition: |z 9781493966561 |
| 830 | 0 | |a Methods in molecular biology (Clifton, N.J.) ; |v v. 1533. |x 1064-3745 |0 http://id.loc.gov/authorities/names/n92002874 | |
| 856 | 4 | 0 | |u https://link.springer.com/10.1007/978-1-4939-6658-5 |y Springer Nature |
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| 928 | |t Library of Congress classification |a QK981 |l Online |c UC-FullText |u https://link.springer.com/10.1007/978-1-4939-6658-5 |z Springer Nature |g ebooks |i 12543618 | ||