Computational systems biology : methods and protocols /

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Bibliographic Details
Imprint:New York : Humana Press : Springer, [2018]
©2018
Description:1 online resource (xii, 417 pages) : illustrations (some color)
Language:English
Series:Methods in molecular biology, 1940-6029 ; 1754
Springer protocols
Methods in molecular biology (Clifton, N.J.) ; v. 1754.
Springer protocols (Series)
Subject:
Format: E-Resource Book
URL for this record:http://pi.lib.uchicago.edu/1001/cat/bib/11550374
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Other authors / contributors:Huang, Tao, editor.
ISBN:9781493977178
1493977172
9781493977161
1493977164
Digital file characteristics:text file PDF
Notes:Includes bibliographical references and index.
Online resource; title from PDF title page (SpringerProtocols, viewed March 15, 2018)
Other form:Print version: Computational systems biology. New York : Springer, ©2018 9781493977161
Table of Contents:
  • DNA sequencing data analysis / Keyi Long, Lei Cai, and Lin He
  • Transcriptome sequencing : RNA-seq / Hong Zhang, Lin He, and Lei Cai
  • Capture hybridization of long-range DNA fragments for high-throughput sequencing / Xing Chen, Gang Ni, Kai He, Zhao-Li Ding, Gui-Mei Li, Adeniyi C. Adeola, Robert W. Murphy, Wen-Zhi Wang, and Ya-Ping Zhang
  • Introduction and clinical application of cell-free tumor DNA / Jun Li, Renzhong Liu, Cuihong Huang, Shifu Chen, and Mingyan Xu
  • Bioinformatics analysis for cell-free tumor DNA sequencing data / Shifu Chen, Ming Liu, and Yanqing Zhou
  • Overview of genome-wide association studies / Michelle Chang, Lin He, and Lei Cai
  • Integrative analysis of omics big data / Xiang-Tian Yu and Tao Zeng
  • Reconstruction and analysis of gene regulatory networks / Guangyong Zheng and Tao Huang
  • Differential coexpression network analysis for gene expression data / Bao-Hong Liu
  • iSeq : web-based RNA-seq data analysis and visualization / Chao Zhang, Caoqi Fan, Jingbo Gan, Ping Zhu, Lei Kong, and Cheng Li
  • Revisit of machine learning supported biological and biomedical studies / Xiang-tian Yu, Lu Wang, and Tao Zeng
  • Identifying interactions between long noncoding RNAs and diseases based on computational methods / Wei Lan, Liyu Huang, Dehuan Lai, and Qingfeng Chen
  • Survey of computational approaches for prediction of DNA-binding residues on protein surfaces / Yi Xiong, Xiaolei Zhu, Hao Dai, and Dong-Qing Wei
  • Computational prediction of protein O-GlcNAc modification / Cangzhi Jia and Yun Zuo
  • Machine learning-based modeling of drug toxicity / Jing Lu, Dong Lu, Zunyun Fu, Mingyue Zheng, and Xiaomin Luo
  • Metabolomics : a high-throughput platform for metabolite profile exploration / Jing Cheng, Wenxian Lan, Guangyong Zheng, and Xianfu Gao
  • Single-cell protein assays : a review / Beiyuan Fan, Junbo Wang, Ying Xu, and Jian Chen
  • Data analysis in single-cell transcriptome sequencing / Shan Gao
  • Applications of single-cell sequencing for multiomics / Yungang Xu and Xiaobo Zhou
  • Progress on diagnosis of tuberculous meningitis / Yi-yi Wang and Bing-di Xie
  • Insights of acute lymphoblastic leukemia with development of genomic investigation / Heng Xu and Yang Shu.