Computational cell biology : methods and protocols /

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Bibliographic Details
Imprint:New York, N.Y. : Humana Press : Springer, [2018].
c2018
Description:1 online resource (xi, 436 pages) : illustrations (some color)
Language:English
Series:Methods in molecular biology, 1940-6029 ; 1819
Methods in molecular biology (Clifton, N.J.) ; v. 1819.
Subject:
Format: E-Resource Book
URL for this record:http://pi.lib.uchicago.edu/1001/cat/bib/11737363
Hidden Bibliographic Details
Other authors / contributors:Stechow, Louise von, editor.
Delgado, Alberto Santos, editor.
ISBN:9781493986187
149398618X
9781493986170
1493986171
Digital file characteristics:text file PDF
Notes:Includes bibliographical references and index.
Online resource; title from PDF title page (SpringerLink, viewed November 12, 2018).
Other form:Print version: Computational cell biology . New York, N.Y. : Humana Press, 2018 9781493986170
Table of Contents:
  • Rule-based models and applications in biology / Álvaro Bustos, Ignacio Fuenzalida, Rodrigo Santibáñez,Tomás Pérez-Acle, and Alberto J.M. Martin
  • Optimized protein-protein interaction network usage with context filtering / Natalia Pietrosemoli and Maria Pamela Dobay
  • SignaLink : multilayered regulatory networks / Luca Csabai, Márton Ölbei, Aidan Budd, Tamás Korcsmáros, and Dávid Fazekas
  • Interplay between long noncoding RNAs and microRNAs in cancer / Francesco Russo, Giulia Fiscon, Federica Conte, Milena Rizzo, Paola Paci, and Marco Pellegrini
  • Methods and tools in genome-wide association studies / Anja C. Gumpinger, Damian Roqueiro, Dominik G. Grimm, and Karsten M. Borgwardt
  • Identifying differentially expressed genes using fluorescence-activated cell sorting (FACS) and RNA sequencing from low input samples / Natalie M. Clark, Adam P. Fisher, and Rosangela Sozzani
  • Computational and experimental approaches to predict host-parasite protein-protein interactions / Yesid Cuesta-Astroz and Guilherme Oliveira
  • Integrative approach to virus-host protein-protein interactions / Helen V. Cook and Lars Juhl Jensen
  • SQUAD method for the qualitative modeling of regulatory networks / Akram Méndez, Carlos Ramírez, Mauricio Pérez Martínez, and Luis Mendoza
  • miRNet--functional analysis and visual exploration of miRNA-target interactions in a network context / Yannan Fan and Jianguo Xia
  • Systems biology analysis to understand regulatory miRNA networks in lung cancer / Meik Kunz, Andreas Pittroff, and Thomas Dandekar
  • Spatial analysis of functional enrichment (SAFE) in large biological networks / Anastasia Baryshnikova
  • Toward large-scale computational prediction of protein complexes / Simone Rizzetto and Attila Csikász-Nagy
  • Computational models of cell cycle transitions / Rosa Hernansaiz-Ballesteros, Kirsten Jenkins, and Attila Csikász-Nagy
  • Simultaneous profiling of DNA accessibility and gene expression dynamics with ATAC-Seq and RNA-Seq / David G. Hendrickson, Ilya Soifer, Bernd J. Wranik, David Botstein, and R. Scott McIsaac
  • Computational network analysis for drug toxicity prediction / C. Hardt, C. Bauer, J. Schuchhardt, and R. Herwig
  • Modeling the epigenetic landscape in plant development / Jose Davila-Velderrain, Jose Luis Caldu-Primo, Juan Carlos Martinez-Garcia, and Elena R. Alvarez-Buylla
  • Developing network models of multiscale host responses involved in infections and diseases / Rohith Palli and Juilee Thakar
  • Exploring dynamics and noise in gonadotropin-releasing hormone (GnRH) signaling / Margaritis Voliotis, Kathryn L. Garner, Hussah Alobaid, Krasimira Tsaneva-Atanasova, and Craig A. McArdle.