Protein structure prediction : methods and protocols /

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Bibliographic Details
Imprint:	Totowa, N.J. : Humana Press, c2000.
Description:	x, 422 p. : ill. ; 24 cm.
Language:	English
Series:	Methods in molecular biology ; 143 Methods in molecular biology (Clifton, N.J.) ; v. 143.
Subject:	Proteins -- Structure -- Mathematical models. Amino acid sequence. Protein Conformation. Models, Molecular. Probability. Amino acid sequence. Proteins -- Structure -- Mathematical models.
Format:	Print Book
URL for this record:	http://pi.lib.uchicago.edu/1001/cat/bib/5845226

Hidden Bibliographic Details
Other authors / contributors:	Webster, David M.
ISBN:	0896036375
Notes:	Includes bibliographical references and index.

Table of Contents:

Preface
Contributors
1. Multiple Sequence Alignment
2. Protein Structure Comparison Using SAP
3. Discovering Patterns Conserved in Sets of Unaligned Protein Sequences
4. Identification of Domains from Protein Sequences
5. Third Generation Prediction of Secondary Structures
6. Comparative Protein Structure Modeling: Introduction and Practical Examples with Modeller
7. A Practical Guide to Protein Structure Prediction
8. Derivation and Testing Residue--Residue Mean--Force Potentials for Use in Protein Structure Recognition
9. Genetic Algorithms and Protein Folding
10. Scoring Functions for ab initio Protein Structure Prediction
11. Ab Initio Loop Modeling and Its Application to Homology Modeling
12. The Dead-End Elimination Theorem: Mathematical Aspects, Implementation, Optimizations, Evaluation, and Performance
13. Classification of Protein Folds
14. Modeling Transmembrane Helix Bundles by Restrained MD Simulations
15. Predictive Models of Protein-Active Sites
16. Flexible Docking of Peptide Ligands to Proteins
17. Geometrical Docking Algorithms: A Practical Approach
18. Protein--Protein Docking: Generation and Filtering of Complexes
Index

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